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smart-seq single-cell rna sequencing data set  (Allen Institute for Brain Science)

 
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    Allen Institute for Brain Science smart-seq single-cell rna sequencing data set
    Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger <t>RNA</t> (mRNA) levels do not predict glucocorticoid-induced leucine zipper (GILZ) mRNA expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and GILZ ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell <t>sequencing</t> data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Tsc22d3 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.
    Smart Seq Single Cell Rna Sequencing Data Set, supplied by Allen Institute for Brain Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq+single-cell+rna+sequencing+data+set/single+cell+sequencing/pmc09791178-32-6-15
    Average 90 stars, based on 1 article reviews
    smart-seq single-cell rna sequencing data set - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "Do Corticosteroid Receptor mRNA Levels Predict the Expression of Their Target Genes?"

    Article Title: Do Corticosteroid Receptor mRNA Levels Predict the Expression of Their Target Genes?

    Journal: Journal of the Endocrine Society

    doi: 10.1210/jendso/bvac188

    Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger RNA (mRNA) levels do not predict glucocorticoid-induced leucine zipper (GILZ) mRNA expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and GILZ ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Tsc22d3 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.
    Figure Legend Snippet: Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger RNA (mRNA) levels do not predict glucocorticoid-induced leucine zipper (GILZ) mRNA expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and GILZ ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Tsc22d3 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.

    Techniques Used: Expressing, Sequencing

    Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger RNA (mRNA) levels do not predict Fkbp5 expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and glucocorticoid-induced leucine zipper (GILZ) ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Fkbp5 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions, or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.
    Figure Legend Snippet: Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger RNA (mRNA) levels do not predict Fkbp5 expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and glucocorticoid-induced leucine zipper (GILZ) ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Fkbp5 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions, or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.

    Techniques Used: Expressing, Sequencing

    11βHsd1 expression weakly correlates with glucocorticoid-induced leucine zipper (GILZ) or FKBP5 messenger RNA (mRNA) expression in hippocampal glutamatergic and GABAergic neurons. Cellular 11βHSD1, GILZ, and FKBP5 mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. A to F, 11βHsd1 expression poorly predicted Tsc22d3 or Fkbp5 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions, or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, *** P less than .001.
    Figure Legend Snippet: 11βHsd1 expression weakly correlates with glucocorticoid-induced leucine zipper (GILZ) or FKBP5 messenger RNA (mRNA) expression in hippocampal glutamatergic and GABAergic neurons. Cellular 11βHSD1, GILZ, and FKBP5 mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. A to F, 11βHsd1 expression poorly predicted Tsc22d3 or Fkbp5 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions, or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, *** P less than .001.

    Techniques Used: Expressing, Sequencing

    Related Articles

    RNA Sequencing:

    Article Title: Do Corticosteroid Receptor mRNA Levels Predict the Expression of Their Target Genes?
    Article Snippet: Single-cell data were obtained from the SMART-seq single-cell RNA sequencing data set published by the Allen Institute for Brain Science [ ].

    Expressing:

    Article Title: Do Corticosteroid Receptor mRNA Levels Predict the Expression of Their Target Genes?
    Article Snippet: Single-cell data were obtained from the SMART-seq single-cell RNA sequencing data set published by the Allen Institute for Brain Science [ ].

    Sequencing:

    Article Title: Do Corticosteroid Receptor mRNA Levels Predict the Expression of Their Target Genes?
    Article Snippet: Single-cell data were obtained from the SMART-seq single-cell RNA sequencing data set published by the Allen Institute for Brain Science [ ].



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    smart-seq single-cell rna sequencing data set  (Allen Institute for Brain Science)
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    Allen Institute for Brain Science smart-seq single-cell rna sequencing data set
    Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger <t>RNA</t> (mRNA) levels do not predict glucocorticoid-induced leucine zipper (GILZ) mRNA expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and GILZ ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell <t>sequencing</t> data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Tsc22d3 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.
    Smart Seq Single Cell Rna Sequencing Data Set, supplied by Allen Institute for Brain Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq+single-cell+rna+sequencing+data+set/single+cell+sequencing/pmc09791178-32-6-15
    Average 90 stars, based on 1 article reviews
    smart-seq single-cell rna sequencing data set - by Bioz Stars, 2026-09
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger RNA (mRNA) levels do not predict glucocorticoid-induced leucine zipper (GILZ) mRNA expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and GILZ ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Tsc22d3 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.

    Journal: Journal of the Endocrine Society

    Article Title: Do Corticosteroid Receptor mRNA Levels Predict the Expression of Their Target Genes?

    doi: 10.1210/jendso/bvac188

    Figure Lengend Snippet: Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger RNA (mRNA) levels do not predict glucocorticoid-induced leucine zipper (GILZ) mRNA expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and GILZ ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Tsc22d3 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.

    Article Snippet: Single-cell data were obtained from the SMART-seq single-cell RNA sequencing data set published by the Allen Institute for Brain Science [ ].

    Techniques: Expressing, Sequencing

    Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger RNA (mRNA) levels do not predict Fkbp5 expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and glucocorticoid-induced leucine zipper (GILZ) ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Fkbp5 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions, or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.

    Journal: Journal of the Endocrine Society

    Article Title: Do Corticosteroid Receptor mRNA Levels Predict the Expression of Their Target Genes?

    doi: 10.1210/jendso/bvac188

    Figure Lengend Snippet: Mineralocorticoid receptor (MR) and glucocorticoid receptor (GR) messenger RNA (mRNA) levels do not predict Fkbp5 expression in hippocampal glutamatergic and GABAergic neurons. Cellular MR ( Nr3c2 ), GR ( Nr3c1 ), and glucocorticoid-induced leucine zipper (GILZ) ( Tsc22d3 ) mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. MR and GR mRNA levels poorly predicted Fkbp5 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions, or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, ** P less than .01.

    Article Snippet: Single-cell data were obtained from the SMART-seq single-cell RNA sequencing data set published by the Allen Institute for Brain Science [ ].

    Techniques: Expressing, Sequencing

    11βHsd1 expression weakly correlates with glucocorticoid-induced leucine zipper (GILZ) or FKBP5 messenger RNA (mRNA) expression in hippocampal glutamatergic and GABAergic neurons. Cellular 11βHSD1, GILZ, and FKBP5 mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. A to F, 11βHsd1 expression poorly predicted Tsc22d3 or Fkbp5 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions, or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, *** P less than .001.

    Journal: Journal of the Endocrine Society

    Article Title: Do Corticosteroid Receptor mRNA Levels Predict the Expression of Their Target Genes?

    doi: 10.1210/jendso/bvac188

    Figure Lengend Snippet: 11βHsd1 expression weakly correlates with glucocorticoid-induced leucine zipper (GILZ) or FKBP5 messenger RNA (mRNA) expression in hippocampal glutamatergic and GABAergic neurons. Cellular 11βHSD1, GILZ, and FKBP5 mRNA levels were obtained from a previously published single-cell sequencing data set of naive mouse hippocampi. All expression values are log-normalized and scaled according to the Seurat pipeline. A to F, 11βHsd1 expression poorly predicted Tsc22d3 or Fkbp5 expression in A to F, glutamatergic neurons of the dentate gyrus (DG), CA3, and CA1 regions, or in G to L, various subclasses of GABAergic neurons, that is, Vip, Sncg, and Lamp5 neurons. Data were analyzed with simple linear regression. The graphs show the 95% CI, as well as the statistical significance ( P ), slope (β), and strength ( R 2 ) of the correlations found. * P less than .05, *** P less than .001.

    Article Snippet: Single-cell data were obtained from the SMART-seq single-cell RNA sequencing data set published by the Allen Institute for Brain Science [ ].

    Techniques: Expressing, Sequencing